Table II

TCR Gene Usage and Predicted CDR3 Region Protein Sequences

TCR-α T cell lineGene usageCDR3
CD8-1AV1S3, AJ17...CAVRRAAGNKLTFGGG...
CD8-2AV16S1, AJ34...CAVRHNTDKLIFGTG...
DN1AV8S2, AJ57...CAEPLSLPGGSEKLVFGKG...
DN.POTTAV16S1, AJ31...CAVRDEGWARLMFGDG...
LDN5AV3S1, AJ9...CASMYTGGFKTIFGAG...
TCR-β T cell lineGene usageCDR3
CD8-1BV2S1, BJ2S7...CSARTYPGTGFYEQYFGPG...
CD8-2BV9S1, BJ2S1...CASSSMYNEQFFGPG...
DN1BV5S1, BJ2S7...CASSLVRRYEQYFGPG...
DN.POTTBV6S1, BJ2S1...CASSLTRSSHNEQFFGPG...
LDN5BV7S1, BJ2S1...CASSQPIGGGEQFFGPG...
  • The TCR V and J gene usage for each T cell line is indicated. The predicted amino acid sequences from the CDR3 junctional regions of each TCR α and TCR β chain are shown with basic amino acid residues encoded by N nucleotides underscored. These sequence data are available from EMBL/GenBank/DDBJ under accession numbers AF107998AF108007.