The Journal of Experimental Medicine
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Index of Online Supplemental Material for
J. Exp. Med. 10.1084/jem.20080866
McCaughtry et al.

Figure S1 The phenotype of HYcd4 thymocytes on a Bimo background.

Figure S2 The nonselecting phenotype of HYcd4 Dbo mice.

Figure S3 Supporting data for Fig. 4 showing that CCR7 is dispensable for clonal deletion of HYcd4 thymocytes.

Figure S4 Immunofluorescence for active Caspase 3 is highly specific.

Figure S5 A mature and organized medulla is dispensable for clonal deletion.

Figure S6 Supporting data for Fig. 6 showing that radioresistant cells and cortical epithelial cells inefficiently induce apoptosis.

Figure S7 The distribution of CD11c+ and F4/80+ cells in the thymus.

Figure S8 Supporting data for Fig. 8 showing that cortical DC are efficient APC for inducing clonal deletion.





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