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Address correspondence to Susan Moir, Laboratory of Immunoregulation, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bldg. 10, Rm. 6A02, 10 Center Dr., Bethesda, MD 20892. Phone: (301) 402-4559; Fax: (301) 402-5920; email: smoir{at}niaid.nih.gov
| Abstract |
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Key Words: terminal differentiation interferon immune activation gene expression microarray
Abbreviations used in this paper: BLyS, B lymphocyte stimulator; FasL, Fas ligand; ISG, IFN-stimulated gene; SLE, systemic lupus erythematosus; TNFSF, TNF superfamily.
| Introduction |
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Although there is widespread consensus that HIV infection leads to B cell dysfunction, the underlying mechanisms and nature of the dysregulation remain poorly understood. Our previous findings suggested that the hypergammaglobulinemia observed in HIV-infected viremic patients resulted from stimulation of B cell terminal differentiation by HIV-mediated immune activation (9). However, others have proposed that depletion of memory B cells and consequent enrichment of activated naive B cells are the basis for B cell immune dysfunction in HIV-infected patients (23). Our proposal for B cell terminal differentiation was based primarily on the observation that patients who did not suppress their HIV viremia had an increased percentage of B cells that expressed reduced levels of CD21, a marker that has been shown to decrease with differentiation toward the plasma cell phenotype (24). The subpopulation of B cells expressing reduced levels of CD21 was also found to possess plasmacytoid features not found in the CD21high fraction and was also shown to secrete high levels of immunoglobulins and respond poorly to B cell proliferative signals (9). The loss of cell surface CD21 was also associated with decreased levels of CD21 mRNA, further suggesting that the CD21low fraction was associated with B cell terminal differentiation (25), rather than ligand-induced receptor depletion. However, other features of B cell terminal differentiation, such as loss of surface Ig expression and other surface markers such as HLA-DR, CD20, and CD19 were not consistently observed on B cells of HIV-viremic patients, suggesting either that HIV-induced immune activation induces partial terminal differentiation or that a completely unique pathway of aberrant B cell activation occurs in HIV infection.
Considering the current uncertainties associated with HIV-mediated B cell dysfunction, we embarked on a study that began with the analysis of gene expression profiles in B cells of HIV-viremic patients, led to a comprehensive analysis of B cell markers associated with reduced CD21 expression, and culminated in analyses associated with altered expression of members of the TNF superfamily (TNFSF) of receptors. The data presented in this paper strongly suggest that HIV viremia leads to alterations in the expression of TNFSF receptors on B cells, rendering these cells more susceptible to cell death. These findings present a complex picture of survival and death in B cells and how HIV infection can shift this delicate balance and lead to profound dysfunction of the B cell arm of the immune response.
| Materials and Methods |
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Cell Preparation and Cell Surface Marker Analyses.
PBMCs were obtained from leukapheresis or blood draws by Ficoll density gradient centrifugations. B cells were isolated from PBMCs by negative selection using an immunomagnetic column-based technique (StemCell Technologies Inc.). The purity of each B cell preparation, typically >95%, was verified as described previously (4). PE-labeled mAbs were purchased from BD Biosciences or R&D Systems. FITC-labeled anti-CD21 was purchased from Beckman Coulter. Streptavidin-PE, biotin-labeled anti-BCMA, and anti-TACI, as well as unlabeled goat anti-BAFF-R Abs, were purchased from R&D Systems. PE-labeled swine antigoat was purchased from Caltag. B lymphocyte stimulator (BLyS; Human Genome Sciences) was biotinylated with NHS-LC-biotin (Pierce Chemical Co.) according to the manufacturer's recommendations. Negative controls included isotyped-matched mAbs for direct stains and omission of the first Ab for indirect stains. Stained cells were analyzed on a FACSCalibur flow cytometer (BD Biosciences).
DNA Microarray Analyses of Gene Expression.
Total RNA was isolated from 510 x 106 purified B cells using TRIzol (Invitrogen) according to the manufacturer's specifications. Hybridization and DNA microarray analyses were performed as described previously (26). 33P-labeled first-strand cDNA was synthesized from 5 µg of total RNA. cDNA probes were hybridized to DNA arrays comprised of 6,476 genes enriched in clones that had high-quality RefSeq matches. After extensive washing under stringent conditions, the hybridization signal was detected after a 60-h exposure using a FUJI BAS 2500 phosphorimaging system and captured and quantitated using ImaGene 4.0 software (BioDiscovery). After linear normalization to total signal, low expression values were assigned a low signal of 35, which represents the 98th percentile of blank spots, to avoid potential overinterpretation of low-signal changes. Only the data points with a coefficient of variation <0.8 for duplicate spots were included in further analyses. The data were log(2) transformed, and each gene expression profile among all HIV-viremic, HIV-aviremic, and HIV-negative patients was median centered.
B Cell Apoptosis Assay.
Freshly isolated B cells, or enriched CD21low and CD21high subsets (9), were maintained at 4°C or were incubated at 37°C for 2 and 16 h in RPMI 1640 medium plus 10% FCS in the presence or absence of 1 µg/ml FLAG-tagged Fas ligand (FasL; Kamiya Biomedical) or 800 ng/ml BLyS. Cells were collected, washed, resuspended in annexin V binding buffer (BD Biosciences), stained with FITC-labeled annexin V, and PE-labeled anti-CD21 mAb (Biosource International) according to the manufacturer's specifications for Apoptosis Detection Kit 1 (BD Biosciences).
For effect of HIV on Fas-mediated apoptosis, autologous virus was recovered from CD4+ T cells of HIV-viremic patients by coculture with PBMCs from HIV-negative donors as described previously (4), and the virus was clarified and concentrated by ultrafiltration. B cells were incubated with or without FasL in the presence of concentrated virus or concentrated supernatant from PBMCs alone to control for non-HIV effects.
Statistical Analysis.
Group comparisons for surface marker expression on bulk B cells were performed using the nonparametric analysis of variance Kruskal-Wallis test with Dunn's multiple comparison tests for medians. The Spearman rank method was used to test for correlation and adjustment of p-values for multiple testing was done with the Bonferroni method. The differences in cell surface marker expression and BLyS-binding effects relative to CD21 were compared by the two-tailed Wilcoxon signed-rank test.
Online Supplemental Material.
Additional B cell surface marker staining and comprehensive analyses of all markers are presented in Fig. S1 and Table S1. Online supplemental material is available at http://www.jem.org/cgi/content/full/jem.20032236/DC1.
| Results |
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1 and the IgH enhancer sequence found in sterile transcripts preceding gene rearrangement (27), would appear consistent with a more immature phenotype, both have been associated with mature B cell activities. Increased F
1 transcription has been observed during the germinal center reaction (28, 29), whereas IgH enhancer-containing transcripts have been associated with class switching (30) and isolated from germinal centerderived B cells (GenBank/EMBL/DDBJ accession nos. AW402612 and AA280858). As for the other two B cellrelated genes, CD11b and synapsin III, both have been associated with B cell activities (28, 31), although it is currently unknown why they would be overexpressed in B cells of HIV-viremic patients. Overall, these data illustrate both the classic effects of a viral infection on cells of the immune system (32) as shown by the abundance of ISGs, and the unique effect of HIV on B cells (9), as shown by the genes associated with terminal differentiation, including various surface markers (see next paragraph), proteins of secretory pathways, and immunoglobulin-related genes. Of the 17 ISGs found to be up-regulated in B cells of HIV-viremic patients, 9 were identical to genes induced by treatment of cells with IFNs (33) and 5 were identical to those found to be up-regulated in systemic lupus erythematosus (SLE; reference 34), an inflammatory disease that has similarities with HIV infection with regard to perturbations of B cells. Of note, five of the ISGs are also associated with lupus inclusions, intracellular formations found in B cells after treatment with type I IFNs (35), and in lymphoid tissues of HIV-infected patients (36). Several genes up-regulated in B cells of HIV-viremic patients were also found to be up-regulated in multiple myeloma, including BCMA, CXCR3, and annexin A2 (37). Considering that multiple myeloma is a B cell neoplasm characterized by expansion of plasma cells, these similarities in gene expression profiles further implicate terminal differentiation as a mechanism of B cell perturbation in HIV-viremic patients.
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| Discussion |
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The increased expression of the death receptor CD95 and decreased expression of the survival receptor BAFF-R would be predicted to cause a net decrease in B cell numbers in the setting of ongoing HIV replication. The current work did not address this issue directly because its cross-sectional nature and the large donor-to-donor variability in total B cell numbers observed both in HIV-infected and HIV-negative donors were unlikely to yield conclusive results. These limitations were further compounded by complex and controversial issues of increased cell turnover and tissue redistribution associated with HIV viremia, which have been reported mainly for CD4+ T cells, but also suggested for B cells (49, 50). Nonetheless, when total B cell numbers were analyzed from a well-controlled longitudinal study of HIV-infected patients who cycled off (4 wk) and on (8 wk) antiretroviral therapy, a significant inverse correlation was observed between total B cell numbers in peripheral blood and HIV plasma viremia in seven out of nine patients who were on study for a minimum of 60 wk (reference 51 and unpublished data). Hence, despite the increased B cell turnover associated with ongoing HIV replication, there exists clear evidence that it is offset by increased B cell death, possibly as a result of modulations in the expression of TNFSF receptors such as CD95 and BAFF-R.
The roles of recently identified members of the TNFSF of receptors BCMA, TACI, and BAFF-R in B cell survival and proliferation remain nebulous in humans and only partially defined in mice (52, 53). Although a prominent role for BAFF-R in the development of B cells in mice has been definitively shown with BAFF-Rdeficient mice (54), similar targeted deficiencies in BCMA and TACI have failed to demonstrate a clear role for these two receptors in B cell development (5558). Three of these studies found B cell hyperactivity in the TACI-deficient mice, suggesting that TACI is a negative regulator of B cell function (5658). However, TACI-deficient mice have also been shown to be deficient in T-independent humoral responses (56, 57), suggesting that TACI may be necessary for certain functions. In human B cells, the triggering of TACI with agonistic antibodies (NF-
B inducing) has been shown to interfere with CD40-mediated B cell proliferation, suggesting TACI may also deliver inhibitory signals in human B cells (58).
In this work, we observed a pattern of expression of the BLyS receptors BCMA, TACI, and BAFF-R that was clearly modulated by HIV plasma viremia. B cells of HIV-viremic patients expressed increased levels of BCMA, variable levels of TACI, and decreased levels of BAFF-R when compared with HIV-aviremic patients and HIV-negative individuals. These observations are consistent with findings showing that when B cells undergo terminal differentiation in vitro, they undergo the same BLyS receptor modulations as those described in the HIV-viremic patients (40). Also, in agreement with a recent paper describing much stronger binding kinetics between BLyS and BAFF-R than between BLyS and BCMA (46), we found that levels of BAFF-R expression dictated levels of BLyS binding, regardless of increases in TACI and BCMA expression. Furthermore, the loss of BLyS-binding on CD21low B cells of HIV-viremic patients also translated into a loss in BLyS-mediated survival, as indicated by increased apoptosis of CD21low compared with CD21high B cells in response to BLyS. Current efforts are underway to further evaluate the consequences of modulations in the expression of BCMA, TACI, and BAFF-R relative to responsiveness to the BLyS-related ligand APRIL, which binds BCMA and TACI, but not BAFF-R (54, 59).
The extensive phenotyping performed to better characterize the differentiation stage of B cells of HIV-viremic patients further established a pattern of expression that was clearly delineated by CD21 expression. It should be noted that we found no evidence that the CD21low population of B cells in HIV-viremic patients was any different phenotypically than the CD21low B cells of HIV-aviremic patients and HIV-negative donors; this population was merely overrepresented in HIV-viremic patients compared with the two other groups. Irrespective of disease status, the CD21low population was always more susceptible to apoptosis than its CD21high counterpart (Fig. 4 A). The B cell surface markers that were found to be up-regulated in HIV-viremic patients at the gene expression level were also found to be up-regulated at the protein level on the CD21low B cells. Consistent with published literature on the phenotypic profile of plasma cells (38, 60, 61), B cells of HIV-viremic patients exhibited many of the same characteristic features, including reduced expression of CD20, CD21, CD22, and CD25, as well as increased expression of BCMA, CD38, CXCR3, CD27, and CD86, with the CD21low fraction accounting for most of these modulations. In contrast, certain B cell markers that are down-regulated on plasma cells were not found to be down-regulated on B cells of HIV-viremic patients, including HLA-DR and surface Ig, or in the case of CD20, were down-regulated on a subset of CD21low B cells. CD27 has been shown to be decreased on B cells of HIV-infected patients (62, 63). However, these studies did not focus on the patients with detectable HIV plasma viremia, and we did not focus on patients with very low CD4+ T cell counts who do have a paucity of CD27-expressing B cells (unpublished data). CD22 was also discordant in that, whereas a fraction of CD21low B cells of viremic patients expressed reduced levels of CD22, consistent with features of plasma cells, another fraction expressed higher than normal intensities of CD22 (Fig. S1). Preliminary observations also indicated that expression of CD138 and the transcription factor Blimp-1, hallmarks of plasma cell differentiation (64), was not substantially modulated in and on B cells of HIV-viremic patients (unpublished data). However, considering the variability in the expression of these factors in primary human B cells and the heterogeneity of B cells in the peripheral blood (38, 65, 66), further investigation is needed. Nonetheless, the differences clearly delineated in this work suggest that B cells of viremic patients have a unique differentiation pathway and/or become engaged in terminal differentiation, but do not complete the process. Finally, the levels of CD95 observed on B cells of HIV-viremic patients were higher than those reported for blood-derived plasma cells (38), suggesting that the IFN-stimulated component of responses to viruses that affects CD95 expression may be imparting certain nonplasma cell features in HIV-viremic patients.
The up-regulation of ISGs appears to be an observation common not only to viral infections but also to other pathologic conditions, including inflammatory diseases such as SLE (34) and malignancies associated with high cell turnover (67). Of note, the loss of CD21 expression has also been observed on B cells of patients with inflammatory diseases such as SLE and rheumatoid arthritis (68, 69), but not on B cells of patients with hepatitis C virus infection (70), a viral infection that is often compared with HIV with regard to chronically high viral loads. Hence, it is difficult to establish which of the three factors, namely viral, inflammatory, or terminal differentiation, had a predominant effect on the B cells of HIV-viremic patients. Of note, early histological studies on tissues from HIV-infected patients found evidence of lupus inclusions or cisternae in the lymphoid sections (36), and these same intracellular formations were later reproduced by treating B cell lines with type I IFNs (71), and more recently these inclusions were observed in B cells isolated from HIV-viremic patients (Orenstein, J.M., personal communication). Several components of these inclusions were found to be up-regulated in B cells of HIV-viremic patients, providing a potential explanation for observations made >15 yr ago and further associating ongoing viral replication with morphological abnormalities of B cells.
In conclusion, we have combined DNA microarray data with phenotypic and functional analyses to establish a clear pattern of B cell dysregulation in HIV-viremic patients. This work supports and considerably extends our previous findings that HIV-mediated hyperactivation induces B cell terminal differentiation that is characterized by loss of CD21 expression, reduced proliferative potential, increased immunoglobulin secretion, and appearance of plasmacytoid features. The gene expression profiles described herein are consistent with the notion that HIV-mediated hyperactivation engages B cells along a pathway related to terminal differentiation. Furthermore, in validating the microarray data with phenotypic data, we find that the majority of aberrantly expressed cell surface markers are associated with the CD21low population of B cells that is enriched in HIV-viremic patients, diminished in HIV-aviremic patients, and mostly absent in HIV-negative individuals. Finally, we find that CD21low B cells of HIV-viremic patients, through shifts in expression of TNFSF receptors CD95, BCMA, and BAFF-R, may become more susceptible to cell death and less responsive to survival signals. Increased CD95 expression and correspondingly increased Fas-mediated apoptosis are unique features of the B cell activation profile in HIV-viremic patients as this death receptor is an ISG and not a receptor associated with terminal differentiation (33, 38). Together, the combination of gene expression profiling with phenotypic and functional analyses have enabled us to gain a clear understanding of the pathways that drive B cell dysfunction in HIV-viremic patients and offer new information on avenues that could be considered to reverse these pathways.
| Acknowledgments |
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This work was performed at the National Institute of Allergy and Infectious Diseases, National Institutes of Health.
The authors have no conflicting financial interests.
Submitted: 23 December 2003
Accepted: 14 July 2004
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