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Original Article |
ignatowi{at}immagene.mcg.edu
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Key Words: positive selection agonist peptide CD4+ cells thymus MHC class II
Flow Cytometry Analysis.
Antigen Response and Antagonism Assays of TCR Transgenic Cells.
Peptide Injections and Surgical Procedures.
Protein Sequence Analysis.
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Introduction
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Abstract
Introduction
Materials and Methods
Results
Discussion
References
T cell ontogeny is a multistep process resulting in the generation of mature peripheral CD4+ helper and CD8+ cytotoxic lymphocytes which recognize antigenic peptides presented by MHC class II or I proteins, respectively. During development of the T cell lineage thymocytes are subject to negative and positive selection processes that shape a repertoire of mature T cells that is tolerant to self-peptide–MHC complexes and at the same time diversified enough to mount an effective immune response 12. Selection is based on the interactions of immature CD4+CD8+ thymocytes with peptide–MHC complexes on the surface of thymic stromal cells and results in the three possible outcomes. Thymocytes will die by apoptosis from neglect if their TCRs do not interact with peptide–MHC strongly enough to transduce a signal for positive selection 3. Thymocytes, bearing receptors that interact strongly with self-peptide–MHC, die from activation-induced apoptosis 45. Finally, thymocytes that interact weakly with peptide–MHC undergo positive selection and survive to differentiate into single positive CD4+ or CD8+ cells 67. While the ability of antigenic (i.e., agonistic) peptides to induce apoptosis of CD4+CD8+ thymocytes in vivo is well established, the relationship between antigenicity of peptides and their ability to induce positive selection is controversial 8910. Conflicting results concerning this issue have been obtained in a variety of in vitro systems 11121314, but until now no suitable and relatively simple system to study the identity and properties of peptides that mediate positive selection in vivo has been available. Here we describe for the first time an in vivo experimental model in which administration of soluble peptide(s) results in positive selection of mature, peripheral CD4+ T cells. The peptide ligands that initiate positive selection of CD4+ T cells in this model have agonist activity, whereas antagonist peptides only inhibited this process. Using protein sequence search algorithms we have identified an endogenous agonist peptide which also induced positive selection of transgenic T cells. This implies that natural positive selection of CD4+ thymocytes may be driven by high not only low potency ligands.
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Materials and Methods
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Abstract
Introduction
Materials and Methods
Results
Discussion
References
Mice.
The TCR genes were cloned from T cell hybridoma specific for analogues of the pigeon cytochrome C (PCC[43–58]) peptide and expressed in VA-hCD2 cassette 151617. All TCR transgenic mice (TCRTg) were made by comicroinjection of the respective TCR-
and -β constructs into fertilized eggs of F1 (C57BL/6xCBA/Ca) mice. TCRTg mice were crossed to C57BL6/TCR
chain knockout mice (TCR-
–; The Jackson Laboratory) and to mice deficient in H2-M (H2-M–; provided by E. Bikoff [Harvard University, Cambridge, MA] and R. Germain [National Institutes of Health, Bethesda, MD]) and Ii (Ii–; provided by L. van Kaer, Vanderbilt University, Nashville, TN) to obtain TCRTgTCR-
–H2-M–Ii–.
Monoclonal antibodies specific for CD4(RM4-5), CD8(53-6.7), Vβ8(F23.1), CD69(H1.2F3), CD44 (IM7), and CD62L(MEL-14) were purchased from BD PharMingen and used according to the manufacturer's recommendations. Cells were analyzed using a FACSCaliburTM instrument (Becton Dickinson) and CELLQuestTM software. For intracellular staining, cells were first stained for CD4 and CD8, fixed in 2% paraformaldehyde, permeabilized in 0.1% Tween-20, and stained with anti–bcl-2 antibody (BD PharMingen) according to the manufacturer's instruction.
Proliferation of lymph node cells isolated from TCRTg TCR-
– and TCRTgTCR-
–H2-M–Ii– mice injected with the selecting peptide was measured in response to antigen. Response of the TCRTgTCR-
– lymph node cells to different agonist peptides was measured by proliferation assay in a 96-well plate. 105 responder cells were stimulated with peptides presented by 5 x 105 irradiated C57BL6 or H2-M–Ii– splenocytes. Agonist and control peptides were used at concentrations of 0.01, 0.1, 0.5, 1.0, 2.5, 5.0, 10.0, and 20.0 µM. After 3 d cells were pulsed with 1 µCi of [3H]thymidine added to each well and after 14–16 h thymidine incorporation was measured. The sequences of peptides used were: PCC50V (AEGFSYTVANKNKGIT), PCC50L (AEGFSYTLANKNKGIT), PCC50V54A (AEGFSYTVANKAKGIT), PCC46A49A50V54A (AEGASYAVANKAKGIT), PCC50F54A (AEGFSYTFANKAKGIT), neutral ceramidase (AGFFQYTLYILASEG), and IgGVH (NADFKTPATLTVDKA). All peptides were synthesized by fluorenyl methoxycarbonyl chemistry and purified by reversed-phase high performance liquid chromatography. To compare the antigenic response of CD4+ TCRTg cells lymph node cells were collected from TCRTgTCR-
– and TCRTgTCR-
–H2-M–Ii– mice 2 wk after peptide injection. Single cell suspensions were prepared and CD4+ cells were sorted using magnetic beads coated with anti-CD4 antibodies (MACS®). Purity of sorted cells exceeded 85%. 2 x 104 of purified CD4+ cells per well was used in proliferation assay. Cells were stimulated with increasing concentrations of agonist peptides presented by APCs from wild-type or H2-M–Ii– mice. IgGVH-derived peptide was used as a negative control. Proliferation was measured after 3 d by thymidine incorporation by pulsing cells with 1 µCi of [3H]thymidine for 16 h. Antagonism assay was done by prepulsing 5 x 105 relevant APCs per well for 2 h with 5 µM of the antigenic peptide PCC50V54A, washing, and then exposing them to varying concentrations of peptide analogues with 2 x 104 purified CD4+ TCRTg lymphocytes as responder cells 18. For antagonism assays the percentage of proliferation inhibition was calculated as 100–100* (thymidine incorporation in the presence of antagonist/thymidine incorporation in the absence of antagonist; reference 18).
TCRTgTCR-
– and TCRTgTCR-
–H2-M–Ii– were injected intraperitoneally with agonist and control peptides dissolved in PBS. Highly hydrophobic neutral ceramidase peptide was initially dissolved in DMSO followed by dilution in PBS. After indicated time mice were killed, thymus and lymph nodes were collected and single cell suspensions were prepared. Pups were injected with 2 µg of peptide subcutaneously 12–24 h after birth and thymi were transplanted into recipient mice 24 h after injection. 5–8-wk-old TCRTgTCR-
–H2-M–Ii– mice were used for thymectomy or as thymic transplant recipients. Surgical procedures were performed as described previously 19. Mice were handled accordingly with the institutional guidance.
Protein sequence database at the National Center for Biotechnology Information was searched using BLAST, Psi-BLAST, and FASTA search algorithms with the protein motif (AF)XX(AT)(VLFI)AXX(AN) as a query.
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Results
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Abstract
Introduction
Materials and Methods
Results
Discussion
References
Characterization of Peptide Agonists for the PCC-specific Transgenic
β TCR.
To examine the role of peptides during positive selection in vivo, we generated transgenic mice expressing class II–restricted TCR specific for analogues of a PCC(43–58) peptide presented by the Ab molecule 16. This receptor recognizes analogues of PCC(43–58) in which aspartic acid in position 50 is replaced by amino acids with neutral/hydrophobic (PCC50V, PCC50V54A, PCC46A49A50V54A, PCC50L, PCC50F) side chains (Fig. 1). The TCR transgenic mice were backcrossed to C57BL6 TCR-
– knockout mice so that almost all T cells expressing transgenic TCR become CD4+ T cells (Fig. 2A and Fig. B). Initially we examined the capacity of agonist peptides to induce negative selection of transgenic T cells. We found that the efficiency of negative selection correlated with the potency of individual agonist peptides. However, an injection of 20 µg of any tested agonist peptide, in particular a moderate and a strong agonist (PCC50V and PCC50V54A, respectively) did not induce negative selection of transgenic thymocytes as assessed by thymus cellularity, annexin V staining, and TUNNEL assay (Fig. 2C and Fig. D, and data not shown). Strong agonists PCC50L and PCC50V54A (Fig. 2 F) induced profound negative selection when injected at 200 µg per mouse, while moderate agonist PCC50V induced only marginal deletion of CD4+CD8+ cells (Fig. 2 E).
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– mice to Ii– and H2-M– mice to obtain TCRTg on a triple knockout background (TCRTgTCR-
–H2-M–Ii–). The development of the majority of CD4+ thymocytes is severely impaired in mice lacking H2-M and Ii molecules, two molecular chaperones that participate in peptide loading to MHC class II molecules 202122. As expected, the thymic development of the transgenic T cells was arrested at the stage of CD4+CD8+ thymocytes and only very few transgenic CD4+ T cells were detected in the periphery (Fig. 3 A). The lack of the natural positively selecting Ab–peptide complex(es) resulted in a block in thymocyte development and increased thymic cellularity in TCRTgTCR-
–H2-M–Ii– mice. After these observations, we attempted to restore positive selection in TCRTgTCR-
2H2-M–Ii–mice by providing exogenous peptides. A number of irrelevant Ab-binding peptides (IgGVH[59–74], OVA[323–339], E
[52–68]), and analogues of PCC (50A, 50N, 50E, 52Q) without agonist properties had no effect on thymic selection (data not shown). As shown in Fig. 3B–D intraperitoneal injection of a nondeleting dose of PCC50V54A agonist peptide restored selection of CD4+ single positive thymocytes. Simultaneously, a number of CD4+CD8+ thymocytes upregulated CD69 and bcl-2 expression (Fig. 3E and Fig. F). Positive selection of CD4+ thymocytes was sustained for 14 d after a single injection of the selecting peptide ligand (Fig. 3 D). Contrary to the recent report that agonist peptides induce selection of regulatory CD4+CD25+, cells in our model newly selected CD4+ thymocytes were CD25– (data not shown, and reference 23). The cellularity of the thymus and the number of apoptotic cells detected by TUNNEL assay and annexin V staining were the same in controls and in mice injected with 20 µg of agonist peptide PCC50V54A (data not shown). Four other analogues of the PCC peptide, PCC50V, PCC50L, PCC46A49A50V54A, and PCC50F54A, injected at the same dose (20 µg), also restored positive selection of transgenic thymocytes (data not shown). These results prove that positive selection of CD4+ T cells can be induced in vivo by different agonist ligands. An injection of soluble agonist into TCRTgTCR-
–
H2-M–Ii– radiation chimeras also resulted in positive selection of transgenic CD4+ T cells, despite the expression of wild-type Ab–peptide complexes on bone marrow–derived thymic stromal cells (data not shown).
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–H2-M–Ii–mice injected with peptide had
20% CD4+T cells in the lymph nodes when compared with 1–2% CD4+ T cells found in control animals (Fig. 3 C). Newly selected CD4+ T cells had normal levels of TCR and CD4, and the phenotype of naive T cells (CD44–CD62L+; Fig. 3 G). Also the levels of adhesion molecules CD2 (LFA-2) and CD11c (LFA-1) were the same on CD4+ lymphocytes from transgenic and peptide-injected TCRTgTCR-
–H2-M–Ii– mice (Fig. 3 H). Peptide-selected cells responded to the agonist peptide, though with much lower potency than CD4+ transgenic cells isolated from mice expressing wild-type Ab (Fig. 3 I).
Since the selecting peptide is an agonist, one could argue that the observed phenomenon results from the expansion of a small number of peripheral transgenic CD4+ T cells rather than from induced positive selection 24. To test this possibility, two types of experiments were performed. In the first experiment, the TCRTgTCR-
–H2-M–Ii– mice were thymectomized and then injected with the PCC50V54A peptide. 2 wk after injection, the mice were killed and the number of peripheral CD4+ T cells was counted. As shown in Fig. 4 A, the number of CD4 transgenic T cells was very low and did not increase in comparison with control mice that were thymectomized, but did not receive the PCC50V54A peptide. In the second experiment, TCRTgTCR-
–H2-M–Ii– neonates were injected with the PCC50V54A peptide and after 24 h thymi from injected and control neonates were transplanted under the kidney capsules of H2-M–Ii–TCR-
– mice, which are devoid of T cells 25. After 10 d, recipient mice were killed and the presence of transgenic CD4+ T cells in the transplanted thymus and host lymph nodes was determined by FACS® analysis. As shown in Fig. 4 B, transgenic CD4+ T cells were found only in mice grafted with thymi from neonates injected with the selecting peptide. Therefore, we conclude that CD4+ T cells appear in the peripheral lymph nodes of TCRTgTCR-
–H2-M–Ii– injected with the agonist peptide as a result of positive selection by this peptide.
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–H2-M–Ii– mice. Regardless of a wide range of administered doses (up to 50 µg), injection of the antagonist peptides did not result in increased number of CD4+ transgenic T cells in the thymus nor induced deletion of CD4+CD8+ thymocytes (Fig. 6 A). In conclusion, contrary to the "weak affinity" peptide ligands that mediate positive selection of CD8+ T cells, we have found that only agonist not antagonist peptides mediate in vivo positive selection of CD4+ T cells.
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Identification of a Candidate Natural Peptide that Mediates Positive Selection of TCRTg Thymocytes.
Since the sequence of the exogenous selecting peptide(s) has been determined, we hypothesized that the natural selecting ligand exists that has agonist properties. By testing different PCC analogues we have determined that amino acids A or F in position 46, A or T in position 49, A in position 51, and A or N in position 54 are important for binding to Ab. Moreover, amino acids V, L, F, I in position 50 were important to stimulate TCRTg lymphocytes. We have used the peptide motif (AF)XX(AT)(VLFI)AXX(AN) to search the nonredundant protein and EST protein databases using different computer algorithms. These searches resulted in identification of a mouse proteins which may encode natural peptides with agonist properties for our TCR. One of these proteins was the neutral ceramidase that contained amino acid motif FXXTLYXXA where only Y does not match the original motif 33. This protein is ubiquitously expressed in many tissues, including epithelial cells. Subsequently, we synthesized the peptide AGFFQYTLYILASEG which contained the homologous motif sequence. This peptide when tested in vitro acted as weak agonist eliciting proliferation of naive TCRTg CD4+ T cells (Fig. 7 A). Injection of 50 µg of neutral ceramidase peptide into TCRTgTCR-
–H2-M–Ii– mice resulted in positive selection of transgenic CD4+ thymocytes (Fig. 7 C) and the appearance of CD4+ lymphocytes in the peripheral lymph nodes (Fig. 7 D). These peripheral CD4+ cells weakly proliferated when stimulated with agonist peptide PCC50V (Fig. 7 B). Hence using biocomputing analysis we have been able to identify a candidate natural agonist peptide which after injection into TCRTgTCR-
–H2-M–Ii– mice induces positive selection of CD4+ T cells. Our results imply that the natural peptides bound to MHC class II that select thymocytes are recognized by the relevant TCRs with higher affinity than have been previously postulated.
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The data reported in this paper suggest that positive selection is peptide specific and, in a natural environment, mediated by agonist peptide ligands. In contrast, analysis of thymocyte development in mice expressing high density of Ab–single peptide complexes implied that selection of multiple TCRs does not require specific peptide 1544. Results obtained in both experimental models are consistent with the avidity model of positive selection which postulates that a T cell might be positively selected by multiple low affinity or few high affinity MHC–peptide complexes 6. The CD4+ T cells found in mice expressing single AbEp complex had TCRs with undetectable affinity to AbEp (to avoid negative selection), in contrast to transgenic CD4+ T cells described in this paper that are positively selected by few high affinity (agonist) Ab–peptide complexes. An alternative explanation of T cell selection in mice expressing Ab–single peptide complex postulated that most CD4+ lymphocytes are selected on contaminating, low abundance peptides 45 which is consistent with the reported here positive selection by agonist peptides. The ongoing studies on the complexity of peptides present in mice expressing various covalent MHC class II–peptide complexes in vivo should soon reveal how CD4+ T cells develop in these mice.
One of the intriguing phenomenons we have observed is the decreased proliferation of peptide selected CD4+ T cells after TCR stimulation. This effect is not peptide specific since the same cells respond poorly to anti-CD3 antibody stimulation and does not reflect lower expression of the TCR or costimulatory molecules (unpublished data). The discussed feature is also not a characteristic of our experimental system. Cells expressing the same transgenic TCR are very efficiently selected on endogenous peptides present in Ii– mice and have similarly decreased response to TCR stimulation (data not shown). We are currently investigating if this phenomenon is caused by lower MHC class II expression in H2-M–Ii– or Ii– mice, the lack of the selecting peptide ligand in the periphery, decreased life span, or inherently elevated activation threshold due to the nature of the selecting peptide ligand.
Because
β TCRs expressed on CD4+CD8+ thymocytes likely interact with multiple MHC–peptide complexes, the fate of a thymocyte may depend on the net result of all these interactions 3246. Experiments described in this report, where coinjected antagonist peptide inhibited positive selection support this hypothesis and raise interesting questions about how the balance of agonist and antagonist ligands impacts T cell development. The doses of selecting agonist and antagonist peptides were chosen to be low to exclude the possibility that the observed phenomenon is due to competition for Ab binding. Instead, the unique signal induced by both agonist and antagonist could result in the inhibition of positive selection. Since the transition from CD4+CD8+ to CD4+ thymocytes requires 24–48 h experiments where injection of the antagonist peptide is delayed or proceeds the injection of agonist peptide may determine the course of events that lead to inhibition of positive selection by antagonist MHC–peptide ligand.
Recent experiments in reaggregation cultures raised the possibility that bone marrow dendritic cells deliver a strong agonist signal necessary to induce CD4+ T cell differentiation 47. We have investigated the development of transgenic CD4+ T cells in chimeras made by reconstituting H2-M–Ii– mice with the bone marrow from TCRTg TCR-
– mice (TCRTgTCR-
–
H2-M–Ii– chimeras). The development of thymocytes in such chimeras is arrested at the CD4+CD8+ stage despite the presence of selecting wild-type Ab–self-peptide complexes on bone marrow–derived dendritic cells. Mature CD4+ T cells appeared only after injection of the selecting peptide PCC50V54A (data not shown). This suggest that in our in vivo model, in contrast to the reaggregation cultures 47, radioresistant thymic epithelial cells are required to provide an agonist signal that induces thymocyte differentiation towards CD4+ lineage in vivo.
We have induced positive selection of transgenic thymocytes using a peptide dose that did not delete these cells in wild-type mice. The presentation of injected agonist peptides by wild-type Ab molecules present on bone marrow cells in TCRTgTCR-
–
H2-M–Ii– radiation chimeras also did not induce negative selection (data not shown). One could then postulate that agonist peptides differ in their relative capacity to induce positive versus negative selection. Some of these peptides induce negative selection even at a very low dose, but others induce positive selection at a low dose and negative selection only when used at a high dose. Under physiological conditions, it is likely that positively selecting peptides are presented at very low concentration so it seems plausible that these peptides would have agonist activity. Peptide-specific positive selection would favor interaction with a narrow range of more potent agonists while positive selection of more promiscuous TCRs may involve collective interaction with a broader range of peptides sharing lower agonist potency 1648. Alternatively, selection of CD4+ T cells was possible in our system because the positively selecting agonist ligand sets the threshold for negative selection, and negative selection requires an interaction with the more potent agonist ligand 4950. Signaling studies also support the notion that agonist peptides may be natural ligands for selection of the class II–restricted thymocytes 5152, based on the observation that commitment to the CD4 lineage requires a stronger signal via TCR than commitment towards the CD8 lineage. Previously published reports describing natural peptides capable of selecting
β TCR transgenic T cells used mass spectroscopy analysis to identify peptides eluted from MHC molecules 2829. The advantage of this method is that it identifies peptides physically bound to MHC, but because of limited sensitivity of detection this analysis may be biased in favor of the most abundant peptides. Here, we have attempted to use an alternative method to find peptides that may be the natural selecting ligands. We have searched protein database for the presence of a sequence motif that we identified present in agonist selecting peptides. A peptide fragment derived from the identified protein had both agonist properties and positively selected transgenic thymocytes. Although, this method does not guarantee that this particular peptide is presented in the thymus, the expression pattern of neutral ceramidase suggests that this is a good candidate protein to yield selecting peptides 3353. Our approach may become even more useful in the future as more sequences are available in the databases.
Mice transgenic for MHC class II–restricted
β TCR and lacking H2-M and Ii molecules likely constitute a nonselecting environment for most of MHC class II–restricted transgenic receptors studied so far. We show, for the first time, that in vivo administration of soluble peptide may restore positive selection of CD4+ thymocytes in such mice. This strategy may be used to identify and determine the properties of peptides capable of selecting TCR transgenic CD4+ T cells with different antigen specificities in vivo. Since in this experimental model, the onset of positive selection of a large number of thymocytes is known, it may be particularly useful for analysis of gene expression patterns associated with positive selection and lineage commitment of CD4+ thymocytes within hours after the delivery of the positively selecting signal. Furthermore, in this study we have identified a number of selecting and nonselecting peptides so it will be possible, using soluble recombinant proteins, to determine the relationship between the affinity of the TCR for different peptide–MHC class II complexes and the capacity to induce positive selection in vivo. Our finding challenges the existing dogma that low-affinity peptides are predisposed to induce positive selection while high-affinity ligands only induce negative selection. Instead, for CD4+ T cells the latter not the former peptides seem to be predisposed to induce positive selection.
| Acknowledgments |
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This work was supported by National Institutes of Health basic research grants AI41145-01A1 and HD36302-02 to L. Ignatowicz. P. Kisielow is supported by Howard Hughes Medical Institute.
Submitted: 9 February 2001
Revised: 6 June 2001
Accepted: 19 June 2001
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