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Laboratory of Viral Diseases, National Institute of Allergy and Infectious Diseases, Bethesda, Maryland 20892; and the
Laboratory of Molecular Microbiology, National Institute of Allergy and Infectious Diseases, Bethesda, Maryland 20892
| Abstract |
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CD8+ T cells (TCD8+)1 play a critical role in immune responses to many viruses. TCD8+ recognize MHC class I (MHC-I) molecules bearing viral peptides on the surface of virus-infected cells (1, 2). MHC-I molecules consist of three noncovalently associated subunits: an integral membrane glycoprotein of 44 kD (H chain), a small soluble protein (β2-microglobulin [β2m]), and an oligopeptide, usually 8–10 residues in length (3). Peptides are derived from a cytosolic pool of viral and cellular protein precursors (4, 5). Cytosolic peptides are transported into the endoplasmic reticulum (ER) by TAP (transporter-associated with antigen presentation [6–8]). TAP-transported peptides induce the release of newly synthesized H chain– β2m tethered to TAP. The assembled tripartite complex reaches the cell surface via the standard exocytic pathway.
A number of viruses have evolved strategies to downregulate antigen presentation by MHC-I molecules (9, 10). Viral proteins may inhibit MHC-I gene promoter activity (11), retain class I molecules in the ER (12), destroy H chains in the ER (13, 14), dislocate nascent H chains into the proteasome pathway (15), or block the function of TAP (16–18). A decrease in class I expression on the cell surface occurs after infection with HIV type 1 (HIV-1; 19– 21), and has been suggested as a reason for the inability of TCD8+ to eliminate the infection in vivo (22).
The mechanism underlying this phenomenon is uncertain. Transcriptional analyses (11,19) provided evidence that this effect is due to a decrease in the transcription of genes encoding class I H chains. Howcraft et al. (11) used a swine MHC-I gene to demonstrate that the HIV transactivator Tat specifically decreases MHC-I gene promoter activity. However, Matsui et al. (23) found that Tat affects neither the expression, stability, nor transport of H chains. Consistent with these findings, we found that alterations in H chain–encoding transcripts do not account for decreases in MHC-I expression, and suggested that HIV affects class I expression at a posttranscriptional level (20, 21).
In the present communication, we examine the role of the HIV-1–specific Vpu protein in the downregulation of MHC-I molecules. Vpu is an 81-residue oligomeric type 1–anchored membrane protein that consists of a hydrophobic membrane anchor and a polar phosphorylated cytoplasmic tail (24–29). Among primate lentiviruses, Vpu is apparently encoded exclusively by HIV-1 and its close relatives (30). Like other so-called accessory genes of HIV-1, Vpu is not essential for virus replication in vitro (24, 25, 31, 32). However, Vpu consistently increases viral replication in T cell lines (24–26, 31, 32) and primary lymphocyte and macrophage cultures (33). It is possible that Vpu contributes to the increased virulence of HIV-1 relative to HIV-2 (34, 35). This hypothesis is supported by observations that Vpu enhances virus load and spread of infection in cynomolgus monkeys (36) and in SCID mice reconstituted with human immune cells (37).
Two distinct biological activities, which could contribute to the pathogenic potential of HIV-1, are attributed to Vpu: augmentation of virus particle release from the plasma membrane (24, 25, 30–33) and induction of proteolytic degradation of newly synthesized virus receptor CD4 in the ER (38, 39). One direct consequence of the Vpu-mediated CD4 proteolysis is to facilitate transport and processing of the envelope glycoprotein gp160 (38), which would otherwise be trapped in the ER because of the formation of stable complexes with CD4 (40). Therefore, in HIV-1–infected cells, the two separable function of Vpu ensure that sufficient quantities of Env proteins reach the cell surface for incorporation into an increased number of budding virions.
In this report, we demonstrate that Vpu exhibits another important biological activity that could contribute to the increased pathogenicity of HIV-1 in comparison to HIV-2 (34, 35): Vpu decreases the cell surface expression of MHC-I molecules by interfering with an early step in class I biogenesis.
Flow Cytometry.
HeLa cells were infected for various times as indicated in the text with recombinant vaccinia viruses (rVVs) and incubated on ice for 30 min with FITC-conjugated antibodies specific for HLA class I molecules, W6/32 (Accurate Chem. & Sci. Corp., Westbury, NY), human β2m (The Binding Site, Inc., San Diego, CA), mouse CD54 (PharMingen, San Diego, CA), mouse H-2 Kb, or human transferrin receptor (Becton Dickinson, San Jose, CA). Antibodies specific for mouse H-2 Kb were purified from the hybridoma cell line Y3 (American Type Culture Collection HB 176) and FITC-conjugated using standard procedures. After staining, HeLa cells were washed and resuspended in PBS supplemented with 10 µg/ml ethidium homodimer and analyzed by flow cytometry. Nonviable cells were excluded from analysis.
rVVs.
Pulse Chase Metabolic Labeling.
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Materials and Methods
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Abstract
Materials and Methods
Results
Discussion
References
Cell Culture and Infection.
TCD8+ cells were removed from buffy-coat cells of an HIV-negative HLA A-2,3–positive donor by magnetic beads coupled with an mAb specific for human CD8 (Dianova GmbH, Hamburg, Germany). The remaining CD8– cells were stimulated with PHA (2 µg/ml) in the presence of 100 U/ml recombinant IL-2 for 2 d. 106 stimulated cells were infected with 5 x 104 tissue culture infectious doses, each of HIV-1IIIB (41, 42), HIV-2D205, simian immunodeficiency virus (SIV)mac, or HIV-1NL4-3 (43), and the isogeneic vpu mutants HIVNL-U35 (24) and HIVNL4-3/U2/6 (44). A3.01 cells (45) were cultivated in RPMI 1640/FCS. Routinely, 2 x 106 reverse transcriptase units were used to infect 107 A3.01 cells. After 15 h of absorption, cells were maintained at 106 cells/ml as described previously (33, 46). Analyses of MHC-I expression was performed approximately at peak virus production, usually at day 12 after infection.
4 d after infection, aliquots from controls and infected PBL cultures were washed and incubated for 30 min on ice with mAb IOT 2 (Dianova GmbH). Cells were washed, incubated with FITC-conjugated goat anti–mouse Ig for 30 min on ice, washed, fixed in 3.5% formaldehyde, and analyzed on a cytofluorograph. To monitor infections, cells were fixed with 3.5% formaldehyde for 30 min at room temperature, washed, and treated for 20 min at room temperature with 0.25% Triton X-100 in PBS. Cells were then washed, incubated for 30 min at room temperature in 10% heat-inactivated sheep serum, washed, and incubated for 1 h at room temperature with purified polyclonal sheep antibody specific for HIV-1 p24gag (Biochrom, Berlin, Germany). After extensive washing, cells were incubated with a 1:50 dilution of an FITC-conjugated polyclonal goat anti–sheep antibody and analyzed by flow cytometry. For detection of p27gag, the FITC-conjugated mAb 2F12 (Biochrom) was used.
rVVs were generated and propagated as described (47). Vpu-expressing rVVs were produced by cloning either wild-type Vpu from HIV-1NL4-3 (VV-Vpu; 43) or the mutant vpuDEL-1 (VV-UDEL1; 31) behind the early/late VV p7.5 promoter. In brief, a 290-bp AflIII-KpnI fragment of the plasmid pSP-9 (24) or a 242-bp AflIII–KpnI fragment of the plasmid pSP-9/UDEL1 (46) were cloned into the NcoI–KpnI sites of plasmid pSC11 (48) yielding plasmids pSCVpu and pSC-UDEL1, respectively. VV-ICP47 (49), VV-Kd (50), VV-Kb (50), and vCB-3 (51) have been described. VV–intracellular adhesion molecule (ICAM) expressing mouse CD54 was created as described (47) by inserting cDNA (52) behind the early/late VV p7.5 promoter into plasmid pSC11 (48).
At day 4, p.i. aliquots of 107 PBL were labeled with [35S]methionine (2 mCi/ml) for 45 min, chased for the times indicated in the absence of radiolabeled methionine, and lysed in 90 µl of 3-(3-cholamidopropyl)diethylammonio-1 propanesulfonate (CHAPS) buffer (50 mM Tris, pH 8.0, 5 mM EDTA, 100 mM NaCl, 0.5% CHAPS) + 15 µl CHAPS/deoxycholate buffer (CHAPS buffer with 2% deoxycholate). For the immunocollection of MHC-I molecules, lysates were precleared with mouse IgG (1.5 h, 4°C) coupled to protein A–Sepharose followed by specific immunocollection with HLA-specific mAb IOT2 (2 h, 4°C) coupled to protein A–Sepharose. Immunocollected proteins were separated in a 10% SDS-PAGE and analyzed by quantitative fluorography. HeLa cells infected at rVVs with 3–5 PFU/cell were starved for 20 min in methionine-free DMEM and labeled for up to 15 min with [35S]methionine (2 mCi/ml). Cells were washed, chased in DMEM containing 1 mg/ml L-methionine, and lysed in CHAPS/deoxycholate buffer. Cell lysates were precleared by incubation at 4°C for 1 h with GammaBind G–Sepharose preadsorbed with 20 µg of preimmune rabbit IgG, and incubated for 2 h with protein G–Sepharose preloaded with one of the following antibodies: mAb W6/32 (Harlan Sprague Dawley Inc., Indianapolis, IN), mAb SK81075 (Olympus Corp., Lake Success, NY), antihuman β2m serum from rabbit (Dakopatts, Copenhagen, Denmark), mAb TW2.3 specific for vaccinia proteins E3L/E3L* (53), anti-Vpu sera from sheep (28) or rabbit (27), mAb 215 directed against conformed H chain Kd (54), polyclonal rabbit antibodies directed against exon 8 of H-2 K locus H chains (pAbs-ex8; reference 54), or anti-CD4 serum from rabbit (55). Immunoprecipitated proteins were separated in 10% or 12.5% acryl aide gels. Radioactive bands were visualized in fixed gels by fluorography and quantitated using a PhosphorImager.
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Results
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Abstract
Materials and Methods
Results
Discussion
References
Effect of Vpu Expression on HIV-1–mediated Downregulation of Class I Molecules.
We initially analyzed the potential contribution of Vpu to MHC class I cell surface downregulation by comparing the effects of infecting PHA/IL-2–activated, TCD8+-depleted PBL with Vpu expressing HIV-1IIIB or the non-Vpu expressing viruses HIV-2D205, or SIVmac (Fig. 1 A). Surface expression of class I molecules was determined by cytofluorographic analysis of cells indirectly stained using a mAb specific for native, peptide-bearing class I molecules. As previously reported (19, 20), HIV-1 infection resulted in an
10-fold decrease in the class I signal of a subpopulation of cells (Fig. 1 A d). This subpopulation correlates numerically with the number of cells expressing p24gag, and double fluorescence confirmed that class I was selectively decreased in p24gag-expressing cells (not shown). By contrast, infection with SIV or HIV-2 (Fig. 1 A, b and c) did not decrease class I expression to levels observed in HIV-1IIIB–infected cells despite the fact that a comparable percentage of cells expressed viral p24gag antigens at similar levels (Fig. 1 A, f–h).
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Parallel cultures of PBL were infected with equal infectious doses of the three viruses, and cell surface expression of MHC-I molecules was analyzed 4 d after infection using a mAb that recognizes conformed class I molecules. Downregulation of surface class I molecules observed in the presence of wild-type Vpu (Fig. 1 B, b) was greatly compromised by either of the alterations in Vpu (Fig. 1 B, c and d). As above, the biphasic pattern of the histograms observed in the presence of Vpu reflects heterogeneity in HIV infection of the PBL cultures, as clearly revealed by cytofluorographic analysis of p24gag expression (Fig. 1 B, f–h). Importantly, this demonstrated that there was no significant difference in either the number of p24gag-expressing cells or the amount of p24gag expressed by cells infected with the different clones. Thus, the inability of the Vpu mutants to decrease class I expression cannot be trivially attributed to impairment of viral replication and a concomitant decrease in the expression of other viral gene products. The residual slight decrease in class I expression exhibited by the Vpu mutants (Fig. 1 B, c and d) is consistent with recent reports that the HIV-1 accessory protein Nef induces endocytosis of cell surface MHC-I (57).
Biochemical Characterization of Effects of HIV-1–encoded Vpu on Class I Biogenesis.
To further characterize the effect of Vpu on the expression of MHC-I molecules, PHA/ IL-2–activated, TCD8+-depleted PBL from two donors were infected for 4 d with HIVNL4-3 or isogenic vpu mutants, and class I biogenesis was biochemically characterized (Fig. 2). After 45 min of radiolabeling with [35S]methionine and chasing for various times at 37°C, class I molecules reactive with a mAb specific for conformed class I molecules were collected, separated by SDS-PAGE, and quantitated. Cells from either donor infected with wild-type virus demonstrated a 30–40% reduction in the amount of class I molecules recovered at the initiation of the chase, compared to uninfected or vpu-deficient cultures (Fig. 2, B and C). Additionally, an augmented decay of class I H chains was detectable in the presence of wild-type Vpu after a 4-h chase period (Fig. 2 A, 2) relative to either uninfected cells (Fig. 2 A, 1), cells infected with the Vpu-deficient mutant HIVNL-U35 (Fig. 2 A, 3), or the Vpu phosphorylation mutant HIVNL4-3/U2/6 (Fig. 2 C). Note that the effects of Vpu on class I biosynthesis are underestimated in these experiments because not all cells are infected in each culture (Fig. 1 B, f–h). Consistent with the Vpu-dependent effects in PBL (Fig. 2), class I molecules were also affected in a Vpu-dependent manner in HIV-1–infected CD4+ T cell line A3.01 (not shown). Neither the amount of β2m recovered from cell lysates nor its secretion into the culture supernatant was altered by Vpu in HIV-1–infected PBL or T cells (not shown), indicating that Vpu does not prevent class I assembly by reducing β2m to limiting levels. Rather, we conclude that the Vpu-dependent downregulation of class I cell surface expression in cells infected with wild-type HIV-1 largely reflects Vpu-mediated instability of MHC-I molecules due to their improper assembly or enhanced degradation.
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Using a Vpu-specific antiserum, a protein with the predicted mobility of Vpu in SDS-PAGE was recovered from HeLa cells infected with VV-Vpu (Fig. 3 A), but not with VV-UDEL1 or from the uninfected culture. The stability of Vpu expressed by VV-Vpu was comparable to the half life of Vpu previously reported for HIV-1–infected or –transfected human cell lines (25, 44, 46). To characterize the biological activity of Vpu in VV-infected cells, we examined its effects on CD4 biogenesis. Mouse L929 cells were coinfected with VV-Vpu and vCB-3 (expressing wild-type human CD4; reference 51), radiolabeled for 7 min with [35S]methionine, and then chased at 37°C for up to 240 min (Fig. 3 B). Detergent extracts were immunoprecipitated with an anti-CD4 antiserum, and analyzed by SDSPAGE (Fig. 3 B, inset). The kinetics of CD4 decay were determined by calculating the levels of CD4 present at different times relative to the levels of CD4 present at the end of the pulse (0 min), which was defined as 100% (Fig. 3 B). In the presence of rVV expressed Vpu, the half-life of CD4 was
22 min. Similar Vpu activity was observed in CD4+ T cell lines and HeLa cells co-infected with VV-Vpu and vCB-3 (not shown). In the absence of Vpu, CD4 exhibited a t1/2
4 h which is consistent with previously reported half-lives of CD4 in human cell lines (39, 46). Therefore, rVV-expressed Vpu has biological activity comparable to Vpu expressed in human cell lines transfected with vpu+ HIV-1 subgenomic expression vectors (38, 44, 46).
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10 min half-life of Kd folding is consistent with previous findings regarding class I folding (3). We also detected a similar, but less marked, increase in Kd class I molecules collected by pAb-ex8. The increase in this case may be due to initial masking of exon 8 by interaction with molecular chaperones (60). We observed a number of remarkable effects of Vpu on Kd biogenesis. First, approximately two- to threefold less Kd reactive with either mAb 215 or pAb-ex8 was recovered from the unchased samples. Second, instead of an initial increase, the amount of Kd recovered precipitously declined over the first 20 min of chase period. Vpu had no significant effect on the stability of Kd that survived the initial effect, which are transported through the Golgi complex with kinetics similar to Kd synthesized in the control infected cells, as indicated by the recovery of a Kd form with lower mobility on SDS-PAGE (indicated by arrows in Fig. 5, A and B) that probably represents Kd with terminally sialyated N-linked oligosaccharides.
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Several mechanisms, including antigenic drift (63, 66, 67, 68), exhaustion of TCD8+ response by high level of antigen exposure (69), or deficiencies in HIV-1 antigen processing and presentation (11, 19–21, 57) have been proposed for resistance to TCD8+-mediated lysis. In the present paper, we show that Vpu interferes with the expression of MHC-I molecules on the surface of HIV-1–infected cells. Indeed, viruses lacking Vpu demonstrate only a minor decrease in class I expression. It seems, therefore, that the Tat-mediated decrease in class I transcripts (11) plays little role (23) in the decrease in class I expression. Rather, we conclude that Vpu is required for most of the inhibition of cell surface MHC-I expression seen in HIV-infected cells, and propose that this may contribute to the inability of HIV-specific TCD8+ to eradicate the virus in infected individuals.
When expressed in the context of HIV-1 infection, we observed two effects of Vpu on class I molecules: (a) decreased recovery of class I H chains collected with immature N-linked oligosaccharides immediately after [35S]methionine labeling and (b) decreased stability of class I molecules with mature N-linked oligosaccharides. Only the former effect was observed using rVV to express Vpu. There are several explanations for this discrepancy. First, Vpu may act in concert with other viral gene products to affect the stability of class I molecules expressed on the cell surface. In this regard, it was recently reported that the HIV Nef gene product induces the degradation of cell surface class I molecules (57). Possibly, the activity of Nef and/or Vpu is increased by coexpression of both proteins. Second, alterations in cellular metabolism induced by rVV infection may interfere with the ability of Vpu to affect cell surface class I molecules. Third, Vpu is known to augment by two to threefold virus release from PBL (33). Since in HIV-1 particles, class I molecules constitute up to
20% of the concentration of Gag protein on a molar basis (58), it is likely that at least some of Vpu-dependent loss in class I molecules with mature N-linked oligosaccharides is due to increased virion production with its attendant increase in class I shedding.
When expressed by rVV, Vpu reduced the amount of class I molecules recovered after brief labeling with [35S]methionine, and, during a 20-min chase period, Vpu also decreased the metabolic stability of the H chains with immature N-linked oligosaccharides that escaped the immediate effects of Vpu. We interpret the latter phenomenon to represent the continuation of the same process resulting in decreased recovery of pulse-labeled heavy chains. Importantly, the effect of Vpu on class I molecules was clearly distinguished from that of ICP47 which acts by blocking the peptide transporting activity of TAP. This indicates that the effects of Vpu on class I biogenesis do not result from a decrease in the quantity or quality of peptides available for class I binding. We have not formally demonstrated that Vpu induces the degradation of MHC-I molecules. It is also possible that the decreased recovery of class I molecules is due to Vpu-induced decreases in solubility of class I molecules in the detergents used for extraction, or to the association with proteins that block antibody accessibility to class I molecules.
How might Vpu compromise biogenesis of class I molecules? It was recently demonstrated (46) that the two previously defined biological functions of Vpu, CD4 degradation and regulation of virus release, are controlled by two separable structural and functional domains. CD4 degradation requires phosphorylation of the Vpu cytoplasmic tail (44) and the binding of Vpu to CD4 (70) trapped in the ER by complex formation with the HIV-1 envelope precursor gp160 (40). In contrast, the effect of Vpu on virus particle release is regulated by an ion channel activity of its transmembrane domain (71, 72), occurs in a post-ER compartment (44), and does not require phosphorylation of Vpu (44). Vpu, therefore, possesses at least two distinct activities: first, alteration of the ionic milieu in a post-ER compartment, and second, targeting of proteins located in the ER for destruction. Our proposal that Vpu induces a rapid decay of nascent class I H chains is more consistent with the known ER activity of Vpu, and, based on the ability of Vpu to induce proteolysis of nascent CD4 in the ER (38, 39), it is likely that Vpu acts similarly on MHC class I molecules.
It was recently demonstrated that the US2 and US11 gene products of human cytomegalovirus are able to induce the rapid degradation of class I H chains (15, 73). Both act by routing newly synthesized class I molecules to the cytosol, where degradation requires the activity of proteasomes, in as much as it was blocked by proteasome inhibitors (15). The interaction of H chains with one of the components of the translocon suggest that US11 directs H chains in a retrograde fashion through the sec61-containing pore used to insert proteins into the ER (73). Indeed, based on this and other recent findings in Saccharomyces cerevisae (74), it seems likely that many cases of presumed degradation of membrane proteins by ER proteases are, in fact, due to routing of proteins to the cytosol where they are degraded in a process requiring active proteasomes. It is necessary to reexamine if the Vpu-induced CD4 degradation involves the ubiquitin-proteasome pathway and whether a similar process is used for class I molecules. It will also be of great interest to determine the shared features of class I H chains and CD4 that target them for Vpu-induced destruction while other glycoproteins such as Env, CD8 (75), CD54, and CD72 are spared.
In summary, our data indicate that Vpu is the major factor in the reduction of MHC class I molecules on HIV-1 infected cells. This adds another function to the two previously ascribed to Vpu, CD4 degradation and virus release. It is possible that one or more of these functions is an unintended byproduct of the other(s). However, it is equally plausible that each contributes to the evolutionary fitness of the virus. The relative contributions of these effects may vary depending on the nature of other viral genes or the host response to the virus. It will be a challenge to determine the biological significance of these three functions of Vpu.
| Acknowledgments |
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Submitted: 3 April 1996
Revised: 28 January 1997
1Abbreviations used in this paper: β2m, β2-microglobulin; CHAPS, 3-(3cholamidopropyl)diethylammonio-1 propane sulfonate; ER, endoplasmic reticulum; pAbs-ex8, exon 8–specific polyclonal antibodies; rVV, recombinant VV; SIV, simian immunodeficiency virus; TAP, transporter associated with antigen presentation; TCD8+, CD8+ T cells; VV, vaccinia virus.
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