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Peptides derived from proteins degraded in the cytosol are presented to the immune system by class I MHC molecules (1). Assembly of the class I MHC heavy chain, a type I membrane glycoprotein, with β2-microglobulin (β2m)1 and peptide occurs rapidly after cotranslational insertion of the subunits into the endoplasmic reticulum (2). En route to heterotrimer formation, the nascent heavy chain transiently associates with the endoplasmic reticulum (ER) resident proteins calnexin and calreticulin, lectins that bind to and retain incompletely assembled or misfolded proteins in the ER (3). Inhibition of the binding of calnexin and/or calreticulin to the nascent murine class I heavy chain decreases the efficiency of assembly of the latter with β2m (4) in agreement with studies on influenza hemagglutinin maturation, in which newly synthesized hemagglutinin subunits were more likely to aggregate and/or form aberrant disulfide bonds in the absence of calnexin/calreticulin association (5). After the heavy chain and β2m associate, the heterodimer binds to the peptide transporter complex TAP1–TAP2 (6, 7), an interaction that likely facilitates peptide loading of the empty class I molecule. Properly assembled class I complexes appear rapidly (<5 min) after initial completion of the polypeptide chains (8), and are subsequently transported to the plasma membrane via the secretory pathway. Once at the cell surface, class I molecules are largely stable (9), although exchange of bound β2m for bovine β2m present in serum has been observed for both murine and human class I molecules (10). Little if anything is known about how class I molecules are destroyed after they have exceeded their useful lifespan at the cell surface.
Antibody reagents that have been prepared against class I molecules can be categorized as (a) folding or assembly independent, (b) folding or assembly dependent, or (c) specific for the free heavy chain. For example, in the case of the mouse class I molecules, the antiserum p8 (11), raised against a peptide derived from the cytoplasmic tail of H-2Kb molecules, recognizes all forms of the H-2Kb heavy chain, whereas the mAb Y3 (12) binds only to properly conformed states, and the rabbit anti free-heavy chain serum binds to nonassembled material exclusively (13). Unfolded forms of class I heavy chain are likely to appear at two points during the lifetime of the molecule: early in the course of folding and assembly in the ER, and later, immediately before degradation. To characterize this population of class I heavy chains in living cells, we have prepared three mAbs against denatured Kb molecules that recognize nonassembled heavy chains exclusively. Folding and assembly studies on other glycoproteins such as the mouse class I molecule H-2Ld (14, 15), or the influenza hemagglutinin molecule (5), have utilized conformation-dependent antibodies to characterize the structure of biosynthetic intermediates; this study complements those by utilizing antibodies whose epitopes are exposed only when the protein is unfolded and has not yet associated with β2m. We show that these antibodies can be used to immunoprecipitate both assembly and degradation intermediates from pulselabeled cells. Our results suggest that the folding of the extracellular region is a rapid process, in which all of the epitopes detected by our antibodies disappear synchronously.
Antibodies.
Western Blotting.
Pulse Chase Analyses and Immunoprecipitations.
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Materials and Methods
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Abstract
Materials and Methods
Results
Discussion
References
Cell Lines.
The Rauscher virus–transformed mouse lymphoma cell line RMA (16) was grown in RPMI-1640 supplemented with 10% fetal calf serum, L-glutamine (2 mM), penicillin (1:1000 dilution U/ml), streptomycin (100 µg/ml), sodium pyruvate (1 mM; GIBCO BRL, Gaithersburg, MD), nonessential amino acids (0.1 mM; GIBCO BRL), and β-mercaptoethanol (0.1 mM; American Bioanalytical, Natick, MA). Splenocytes from C57BL/6 mice were stimulated in the above medium supplemented with 2.5 µg/ml ConA for 48 h before labeling.
The following antisera and mAbs were used: Y3 (IgG2b; recognizes the
1/
2 domain of properly conformed Kb molecules; 12), rabbit anti–mouse free heavy chain (Raf HC; recognizes non-β2m-associated mouse class I heavy chains; 13), rabbit anti-p8 (recognizes the cytoplasmic tail of Kb; prepared in our lab essentially as described 11) and rabbit anti-calnexin (recognizes the COOH-terminus of calnexin; a gift of Dr. D. Williams, University of Toronto, Canada). The conformation sensitive rabbit anti-H2 serum was provided by Dr. S. Nathenson. The mAbs introduced in this study (KU1, KU2, and KU4) were generated by immunizing mice with inclusion bodies of recombinantly expressed Kb heavy chains (a gift of Dr. S. Nathenson, Albert Einstein University, NY). Production of hybridomas was performed as described (17). All three antibodies were purified from cell culture supernatants with protein A–Sepharose (Repligen Corp., Cambridge, MA), and used in immunoprecipitations at 10 µg/ml lysate.
107 freshly isolated splenocytes from C57BL/6 (b haplotype), BALB/c (d haplotype), C3H (k haplotype), or PLJ (u haplotype) mice were lysed directly in either 2x SDS sample buffer or 1x IEF sample buffer and run on a 12.5% SDS-PAGE gel, or 1D–IEF gel (18), respectively. Before blotting, the IEF gel was washed five times (10 min each) with 300 ml of a solution of 50% (vol/vol) methanol, 5 mm Tris–HCl, pH 8.0, and 1% SDS. The transfer to nitrocellulose was performed in 25 mM Tris base, 200 mM glycine, and 20% methanol for 2.5 h at 400 mA in a Bio Rad Trans Blot Cell (Bio Rad, Hercules, CA). After a 2 h incubation in blocking buffer (phosphate-buffered saline with 10% nonfat powdered milk and 0.05% Tween-20), blots were probed with either Raf HC (1/3000 dilution) or KU2 (5 µg/ml) overnight, washed in PBS/0.05% Tween-20, and probed for 1 h with horseradish peroxidase–conjugated goat anti–rabbit or goat anti– mouse IgG (Southern Biotechnology Assoc., Birmingham, AL) before visualization with ECL (Kirkegaard and Perry Laboratories, Gaithersburg, MD).
RMA cells or Con A-stimulated splenocytes were starved in RPMI-1640 medium lacking methionine and cysteine for 45 min before being pulsed with 500 µCi/ml [35S]methionine/cysteine (80:20) for the times indicated. When included, DTT (5 mM) was added 5 min before labeling, and the inhibitors N-7-oxadecyl-dNM (7-0-dec; 2 mM) and concanamycin B (Con B; 20 nM) were added during the starvation period. Labeling was terminated by adding 1 mM cold methionine/cysteine to the cell suspension. For the short (1–2 min) pulse–chase analyses (see Figs. 3 and 4), aliquots of cells (2–3 x 106) were removed at each timepoint and directly lysed in ice cold digitonin lysis buffer (0.5% digitonin [Sigma], 25 mM Hepes, pH 7.2, 10 mM CaCl2, 1 mM PMSF, 10 mM iodoacetamide) containing mAb or antiserum. After centrifugation of the cell lysates to remove nuclei and cellular debris, immune complexes were isolated after a 2-h incubation (with agitation) at 4°C by incubation with 50 µl 10% fixed Staphylococcus aureus for an additional 45 min. The S. aureus pellets were washed once in ice cold digitonin lysis buffer and then boiled for 10 min in denaturation/reduction buffer (2% SDS, 5 mM dithiothreitol, 50 mM Tris/HCl, pH 7.8, 1 mM EDTA). After one preclearing step with normal rabbit serum, the eluted Kb class I heavy chains were then reimmunoprecipitated in NP-40 lysis buffer (0.5% NP-40, 50 mM Tris–HCl, pH 7.4, 5 mM MgCl2, 1 mM PMSF, 10 mM iodoacetamide) with the anti-p8 antiserum before gel analysis.
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helix in the
1 domain which forms one side of the peptide-binding groove. The involvement of four out of five consecutive residues in generation of the KU1 epitope argues in favor of recognition of this stretch in nonhelical configuration and, conversely, folding of this region should conceal the KU1 epitope. KU2 binds to an epitope that spans part of the second β strand and connecting loop sequence in the
1 domain (residues 23–30); this region contains residues that directly contact β2m (Y27, E32). The KU4 epitope maps to the first β strand in the
3 domain (residues 193–198) and is adjacent to residues that contact β2m (R202, W204) as well as one of the cysteines (C203) that participates in the
3 disulfide bond. Note that the residues recognized by each antibody, as identified by phage display, are buried or rearranged upon folding of the heavy chain and assembly with β2m.
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We first chose to examine the early events in the assembly of the Kb molecule, by performing a series of brief pulse chase experiments on RMA cells with pulse times of 1 min in order to resolve the rapid early stages of Kb folding and calnexin association. To minimize the lag time between cell lysis and exposure to antibody, aliquots of cells removed from the chase mixture were added directly to lysis buffer containing the relevant antibody (1° antibody) and immune complexes were recovered (8). The crude immunoprecipitates were then denatured completely by exposure to 2% SDS at 100°C, and reimmunoprecipitated with the p8 antiserum, which recognizes all full-length Kb heavy chains. The kinetics of assembly of the Kb molecule are evident from the pulse–chase experiment depicted in Fig. 3 B: properly conformed class I complexes (Y3 immunoprecipitates) form within 5 min, while, conversely, free heavy chains (Raf HC) are present immediately following completion of the 1-min pulse, but are largely assembled beyond 5 min of chase. KU2 also binds to newly synthesized heavy chains extracted within the first 5 min of synthesis, suggesting that the
1 domain β-strand recognized by the antibody remains accessible until the heavy chain has assembled with β2m. Although the recovery of calnexin-bound heavy chains was inefficient, notwithstanding the use of digitonin lysis buffer, the peak of heavy chains coimmunoprecipitated with calnexin occurs around 2–5 min after the 1-min pulse, slightly later than the appearance of the Raf HC and KU2-reactive material. This observed lag suggests that calnexin may not be stably bound to the newly synthesized heavy chains until 1–2 min after completion of the Kb polypeptide chain. Although folding clearly is an early and rapid process, and is likely to start on the nascent chain (5), it is completed posttranslationally.
Both KU1 and KU4 could also immunoprecipitate newly synthesized class I heavy chains within the first few minutes after completion of the polypeptide chain (Fig. 4 A). To determine whether disulfide bond formation is required for the folding of the regions surrounding the epitopes recognized by the antibodies, we performed a short pulse–chase experiment in the presence of the reducing agent dithiothreitol (DTT; 5 mM), which has been shown to prevent the formation of disulfide bonds in living cells (Fig. 4 B) (23). Under these conditions, no properly conformed Kb molecules are detectable, even after 30 min of chase (Y3). Unassembled Kb heavy chains persist throughout the chase (RafHC ), and all three monoclonal antibodies show prolonged reactivity, suggesting that, in the absence of proper disulfide bond formation, the folding of three distinct regions of the class I heavy chain is impeded.
To investigate the role of calnexin/calreticulin in the early folding events of the class I heavy chain, we performed a short pulse–chase experiment in the presence of the glucosidase inhibitor 7-O-dec (Fig. 4 C) (24). By blocking the trimming of terminal glucose residues on the N-linked oligosaccharides of the class I heavy chains, 7-O-dec effectively prevents the association of calnexin/calreticulin with the latter (25). The formation of properly conformed class I complexes (Y3) still occurs in the absence of calnexin/calreticulin binding, consistent with recent studies performed on the folding of influenza hemagglutinin (5), although assembly of free heavy chains with β2 is clearly less complete over the chase period (Raf HC ). All three mAbs react with class I heavy chains immediately after their synthesis, and by 15 min, much of the reactivity has been lost. However, unfolded Kb heavy chains reappear by 30 min, most likely from the disintegration of unstable class I complexes that were formed in the absence of the quality control normally provided by calnexin/calreticulin.
Kb Molecules Unfold at the Cell Surface and Are Degraded in an Acidic Compartment.
To follow the fate of free Kb heavy chains at the cell surface, we performed a pulse– chase experiment on Con A-stimulated splenocytes (prepared from C57BL/6 mice) with a chase time of 2 h, and resolved the Raf HC and KU2-reactive class I material on SDS (Fig. 5 A) and 1D–IEF (Fig. 5 B) gels. The chase was performed at 26°C as well as 37°C, because at the former temperature, the stability of class I molecules has been shown to be markedly enhanced. IEF allows the visualization of sialylated class I heavy chains. Addition of sialic acids to the class I glycan occurs in the trans-Golgi network, and immediately precedes surface deposition. For the description of the results, we shall equate sialylation with cell surface expression. At the onset of the chase, free heavy chains are observed exclusively in the ER (compare SDS and 1D–IEF 0 min timepoints), but appear at the cell surface by 30 min, most likely from disintegration of unstable class I complexes. Fewer free heavy chains are detectable during the 26°C chase, consistent with the increased stability of class I complexes at this temperature.
KU2-reactive heavy chains appear in abundance late in the chase, following the loss of β2m from unstable class I molecules at the cell surface (compare KU2 immunoprecipitates, SDS and IEF, 120 min timepoints). At the lower temperature, free heavy chains that accumulate at the cell surface (see Raf HC, 26° chase, IEF ) maintain a conformation that is not recognized by the KU2 antibody (compare Raf HC and KU2, 120 min timepoints, 26°C chase). Thus, the free heavy chain is capable of retaining the conformation of properly folded molecules, even after β2m dissociation, consistent with studies on the H-2Ld heavy chain (26), as well as with our previous observations (13). The KU2 antibody only recognizes a fraction of the free heavy chains that have been retained in the ER at either temperature (compare Raf HC and KU2, IEF gels); clearly, most of these free heavy chains are maintained in a conformation or complex that obscures the epitope. It is unlikely that calnexin is responsible for this effect, as the noncovalent complex between calnexin and the class I heavy chain does not survive exposure to NP-40 (27). Because Raf HC-reactive Kb heavy chains persist at timepoints where little reactivity is observed with the mAb KU2, we infer that the latter is the more stringent tool for monitoring folding, whereas Raf HC reports on both folding and assembly: association of Kb heavy chains with β2m obscures the Raf HC reactivity. We note that intact cells can be stained with the mAbs as revealed by cytofluorimetry, and that such staining is reduced for cells maintained at 26°C (data not shown), a condition known to prevent unfolding of otherwise labile Kb molecules (28).
By what means are class I complexes at the cell surface degraded? If breakdown occurs in lysosomal compartments, pH neutralization of these compartments might inhibit the dissociation of the heavy chain from the class I molecule, or degradation of the latter, or both. To address this question, we pulse-labeled RMA cells in the presence or absence of Con B, a fungal macrolide antibiotic that inhibits vacuolar H+ ATPases (29), and followed the pools of conformed (Y3), free (Raf HC ), or unfolded (KU2) Kb molecules over the 3-h chase period (Fig. 6). Owing to the higher background typically seen in immunoprecipitations from briefly pulse-labeled RMA cells, we utilized the direct immunoprecipitation/reimmunoprecipitation methodology as described for the short pulse–chase experiments in Figs. 3 and 4. This technique also results in improved recovery of nascent heavy chains that are only reactive with KU2 immediately following their deposition in the ER. Heavy chains that dissociate at the cell surface in untreated cells are largely degraded after 3 h of chase (Fig. 6 A). In contrast, when cells are treated with Con B, the destruction of both Raf HC- and KU2-reactive heavy chains is inhibited. Quantitation by phosphoimaging (Fig. 6 C ) reveals that the decay of properly formed complexes (Y3 panel) is similar in the presence and absence of the inhibitor, suggesting that degradation, but not disintegration, of the class I complex is dependent on lysosomal function. Neuraminidase digestion of intact cells chased in the presence of Con B demonstrates that after 3 h, about half of the sialylated KU2-reactive heavy chains are cell surface disposed, while the remainder resides within the cell, presumably within lysosomes (data not shown).
| Discussion |
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Newly synthesized class I heavy chains interact with the ER resident chaperones calnexin and calreticulin rapidly after synthesis (30, 3). We show that three distinct epitopes, recognized by KU1, KU2, and KU4, persist after synthesis for at least 5 min, during which period the heavy chains are associated with calnexin (Fig. 3). We have been unable to observe any differential loss of reactivity over time with the three antibodies in the course of folding and assembly of the class I heavy chain, in contrast with recent studies performed on the much larger glycoprotein, influenza hemagglutinin, which have delineated a number of discrete folding intermediates (5). If the calnexin–calreticulin interaction is abrogated by incubation of cells with the glucosidase inhibitor 7-O-dec, then a pool of mAb-reactive heavy chains reappears later in the chase, demonstrating that, even though properly conformed molecules are formed in the absence of calnexin–calreticulin association, many of the heavy chains do not fold productively, in agreement with results from the influenza hemagglutinin system (25) as well as with a recent study on the murine class I molecules H-2Kb and Db (4). In the presence of the reducing agent DTT, the folding of the heavy chains is blocked at an early stage, before the packing of the epitopes recognized by each of the three mAbs. However, since calnexin contains disulfide bonds that are essential for its function (31), addition of DTT most likely perturbs the association between the class I heavy chain and calnexin as well, and thus heavy chains synthesized under reducing conditions must attempt to fold both without disulfide bonds and calnexin.
Once the class I molecule has been properly assembled, it proceeds to the cell surface via the secretory pathway. However, soon after deposition at the plasma membrane a fraction of the class I complexes dissociates, as evidenced by the appearance of sialylated free heavy chains 60–120 min after synthesis. In contrast with the pool of intracellular free heavy chains that persist throughout the chase, the cell surface-disposed free heavy chains are also reactive with the KU2 mAb, and thus are unfolded to a greater extent. One explanation for this rapid disintegration of a portion of class I molecules is that complexes that have bound low affinity peptides might attain a transport-competent structure, but then lose peptide once they arrive at the cell surface. This fraction may be stabilized by suitable peptide ligands added extracellularly (32) (33), but should no peptides be available, the complex is more likely to resolve into the separate subunits. Treatment of cells with Con B, a vacuolar proton pump inhibitor, prevents the subsequent destruction of sialylated free heavy chains, implying that degradation occurs intracellularly in an acidic compartment. While generally difficult to detect, internalization of class I molecules is unlikely to be restricted to free heavy chains, and thus, this pathway may provide an opportunity for empty class I molecules that are not degraded to bind peptides derived from exogenous antigens (34).
| Acknowledgments |
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Submitted: 28 June 1996
Revised: 20 September 1996
1Abbreviations used in this paper: β2m, β2-microglobulin; HA, hemagglutinin; Raf HC, rabbit anti-free haevy serum.
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