The Journal of Experimental Medicine
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Published online
doi:10.1084/jem.20072462
The Journal of Experimental Medicine, Vol. 205, No. 10, 2309-2318
The Rockefeller University Press, 0022-1007 $30.00
© Schepers et al.
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ARTICLE

Dissecting T cell lineage relationships by cellular barcoding

Koen Schepers1, Erwin Swart1, Jeroen W.J. van Heijst1, Carmen Gerlach1, Maria Castrucci3, Daoud Sie2, Mike Heimerikx2, Arno Velds2, Ron M. Kerkhoven2, Ramon Arens1, and Ton N.M. Schumacher1

1 Division of Immunology and 2 Central Microarray Facility, the Netherlands Cancer Institute, 1066 CX Amsterdam, Netherlands
3 Istituto Superiore di Sanità, 00161 Roma, Italy

CORRESPONDENCE Ton N.M. Schumacher: t.schumacher{at}nki.nl

T cells, as well as other cell types, are composed of phenotypically and functionally distinct subsets. However, for many of these populations it is unclear whether they develop from common or separate progenitors. To address such issues, we developed a novel approach, termed cellular barcoding, that allows the dissection of lineage relationships. We demonstrate that the labeling of cells with unique identifiers coupled to a microarray-based detection system can be used to analyze family relationships between the progeny of such cells. To exemplify the potential of this technique, we studied migration patterns of families of antigen-specific CD8+ T cells in vivo. We demonstrate that progeny of individual T cells rapidly seed independent lymph nodes and that antigen-specific CD8+ T cells present at different effector sites are largely derived from a common pool of precursors. These data show how locally primed T cells disperse and provide a technology for kinship analysis with wider utility.


Abbreviations used: Cy3, Cyanine-3; DLN, draining LN; LDLN, lung draining mediastinal LN; TDLN, tumor-draining axillary/inguinal LN.

E. Swart and J.W.J. van Heijst contributed equally to this paper.

K. Schepers' present address is Institute for Regeneration Medicine, University of California San Francisco, San Francisco, CA.

R. Arens' present address is La Jolla Institute for Allergy and Immunology, La Jolla, CA.

© 2008 Schepers et al. This article is distributed under the terms of an Attribution–Noncommercial–Share Alike–No Mirror Sites license for the first six months after the publication date (see http://www.jem.org/misc/terms.shtml). After six months it is available under a Creative Commons License (Attribution–Noncommercial–Share Alike 3.0 Unported license, as described at http://creativecommons.org/licenses/by-nc-sa/3.0/).


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