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Department of Medicine, the
Department of Surgery, and the || Howard Hughes Medical Institute, University of Alabama at Birmingham, Birmingham, Alabama 35233-7331; and the ¶ Institute for Advanced Study, Princeton, New Jersey 08540
Quantitative analysis of the relationship between virus expression and disease outcome has been critical for understanding HIV-1 pathogenesis. Yet the amount of viral RNA contained within an HIV-expressing cell and the relationship between the number of virus-producing cells and plasma virus load has not been established or reflected in models of viral dynamics. We report here a novel strategy for the coordinated analysis of virus expression in lymph node specimens. The results obtained for patients with a broad range of plasma viral loads before and after antiretroviral therapy reveal a constant mean viral (v)RNA copy number (3.6 log10 copies) per infected cell, regardless of plasma virus load or treatment status. In addition, there was a significant but nonlinear direct correlation between the frequency of vRNA+ lymph node cells and plasma vRNA. As predicted from this relationship, residual cells expressing this same mean copy number are detectable (frequency <2/106 cells) in tissues of treated patients who have plasma vRNA levels below the current detectable threshold (<50 copies/ml). These data suggest that fully replication-active cells are responsible for sustaining viremia after initiation of potent antiretroviral therapy and that plasma virus titers correlate, albeit in a nonlinear fashion, with the number of virus-expressing cells in lymphoid tissue.
Key Words: HIV-1 infection quantitative RT-PCR lymph node biopsy in situ hybridization HIV pathogenesis
This work was partially supported by Chiron Corp. and the Adult AIDS Clinical Trials Group.
Abbreviations used: FDC, follicular dendritic cell; HAART, highly active antiretroviral therapy; ISH, in situ hybridization; LDA, limiting dilution analysis; QC-RT-PCR, quantitative, competitive RT-PCR; UTP, uridine 5'-triphosphate; vRNA, viral RNA.
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